Demo 07: Generating & Skinning¶

Replace real molecule/reaction names with opaque alien terminology at 3 detail levels.

In [1]:

import sys
from pathlib import Path

# Ensure alienbio is importable
_root = Path(".").resolve().parent.parent / "src"
if str(_root) not in sys.path:
    sys.path.insert(0, str(_root))
_demos = Path(".").resolve().parent
if str(_demos) not in sys.path:
    sys.path.insert(0, str(_demos))

%matplotlib inline

import sys from pathlib import Path # Ensure alienbio is importable _root = Path(".").resolve().parent.parent / "src" if str(_root) not in sys.path: sys.path.insert(0, str(_root)) _demos = Path(".").resolve().parent if str(_demos) not in sys.path: sys.path.insert(0, str(_demos)) %matplotlib inline

In [2]:

from _core import demo_07_skinning
descriptions = demo_07_skinning()
for level, desc in descriptions.items():
    print(f'--- Level {level} ---')
    print(desc)
    print()

from _core import demo_07_skinning descriptions = demo_07_skinning() for level, desc in descriptions.items(): print(f'--- Level {level} ---') print(desc) print()

--- Level 1 ---
System contains 3 substances and 4 processes.
Substances: nyx.ax, kth'el, ule'em

--- Level 2 ---
System contains 3 substances and 4 processes.
Substances: nyx.ax, kth'el, ule'em

Processes:
  myr.ix: nyx.ax -> kth'el
  fraum: kth'el -> nyx.ax
  myris: kth'el -> ule'em
  kthyl: ule'em -> kth'el

--- Level 3 ---
System contains 3 substances and 4 processes.
Substances: nyx.ax, kth'el, ule'em

Processes:
  myr.ix: nyx.ax -> kth'el
  fraum: kth'el -> nyx.ax
  myris: kth'el -> ule'em
  kthyl: ule'em -> kth'el

Current state:
  nyx.ax: 10.00
  kth'el: 0.00
  ule'em: 0.00