Demo 03: Perturbation & Recovery¶

Two experiments: spike recovery and reaction-removal drift.

In [1]:

import sys
from pathlib import Path

# Ensure alienbio is importable
_root = Path(".").resolve().parent.parent / "src"
if str(_root) not in sys.path:
    sys.path.insert(0, str(_root))
_demos = Path(".").resolve().parent
if str(_demos) not in sys.path:
    sys.path.insert(0, str(_demos))

%matplotlib inline

import sys from pathlib import Path # Ensure alienbio is importable _root = Path(".").resolve().parent.parent / "src" if str(_root) not in sys.path: sys.path.insert(0, str(_root)) _demos = Path(".").resolve().parent if str(_demos) not in sys.path: sys.path.insert(0, str(_demos)) %matplotlib inline

Spike Recovery¶

Inject +20 into zynol after 200 equilibration steps.

In [2]:

from _core import demo_03_spike_recovery, demo_03_drift
fig_spike = demo_03_spike_recovery()
fig_spike

from _core import demo_03_spike_recovery, demo_03_drift fig_spike = demo_03_spike_recovery() fig_spike

Out[2]:

Reaction Removal Drift¶

Remove the B→C reaction and observe the system drifting.

In [3]:

fig_drift = demo_03_drift()
fig_drift

fig_drift = demo_03_drift() fig_drift

Out[3]: