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-ABIO Demos- : the demonstration suite: eight sequential tutorial demos and three combination experiments
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ABIO Demos

Demonstration suite for the Alien Biology framework (Milestone 20).

Eight focused demos form a sequential tutorial covering the full system, plus three combination demos showing realistic multi-feature experiments.

All demos use the full pipeline: YAML spec (M18) → rate compilation (M16) → bio.sim() → fetch/store (M17), with scenarios generated from templates (M19).


Focused Demos (Tutorial Sequence)

01 — Quick Start — From YAML to simulation in 10 lines. Define a scenario, compile it, run it, store the results. The complete pipeline in one workflow.

02 — Equilibrium & Stability — How alien biochemistry self-regulates. Run a homeostatic system to convergence, analyze stability with variance tracking.

03 — Perturbation & Recovery — What happens when you poke it? Concentration spikes recover; structural damage causes drift.

04 — Disease Investigation — Alien diseases from symptoms to diagnosis to cure. Measure baselines, detect symptoms, run diagnostic and curative agents.

05 — Multi-Compartment Organisms — Real organisms have structure. Generate complex organisms from templates with build guards, simulate inter-compartment transport.

06 — Life & Survival — Life has rules. Operating envelopes, predator/prey dynamics, reproduction thresholds, and viability checking.

07 — Generating & Skinning — Making biology alien. Generate scenario variants from templates, skin with opaque alien names, produce descriptions at multiple detail levels.

08 — Agent Evaluation — How good is your agent? Difficulty scaling, multi-agent comparison, capability thresholds, and leaderboards.


Combination Demos

Combo A — Full Disease Investigation — The complete pipeline: generate a multi-compartment organism from templates, run to equilibrium, apply disease, detect symptoms, diagnose with competing agents, cure, verify recovery.

Combo B — The Alien Biology Exam — The core use case: generate biology from specs, skin it with alien names, scale difficulty, run an agent battery on opaque tasks, produce a leaderboard. Can an AI reason about unfamiliar biology?

Combo C — Ecosystem Under Stress — Survival under pressure: multi-compartment ecosystem with predation and operating envelopes, hit with environmental stress, monitor population dynamics and viability through recovery.


Optional

LLM Agent Demo — Run Claude on a skinned diagnosis task and compare against oracle and random baselines. Requires ANTHROPIC_API_KEY in .env.